Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | ECS88_RS06290 | P75906 | Negative | 1076998 - 1079016 | 77398.8 |
| tail fiber assembly protein | ECS88_RS06295 | P69435 | Negative | 1079025 - 1081448 | 92249.0 |
| ggdef domain-containing protein | ECS88_RS06300 | P75908 | Positive | 1082036 - 1083403 | 52128.0 |
| Trna-ser | Not Available | Not Available | Positive | 1083508 - 1083595 | Not Available |
| glyoxylate/hydroxypyruvate reductase ghra | ECS88_RS06310 | B7MIH3 | Positive | 1083829 - 1084767 | 35373.5 |
| zinc-binding phosphatase | ECS88_RS06315 | B7MIH4 | Positive | 1084822 - 1085559 | 26833.9 |
| molecular chaperone ycdy | ECS88_RS06320 | P75915 | Positive | 1085583 - 1086137 | 20695.3 |
| duf1097 domain-containing protein | ECS88_RS06325 | P75916 | Positive | 1086239 - 1086730 | 17090.4 |
| curli production assembly/transport protein csgg | ECS88_RS06330 | P0AEA4 | Negative | 1086795 - 1087628 | 30559.0 |
| curli production assembly/transport protein csgf | ECS88_RS06335 | P0AEA0 | Negative | 1087655 - 1088071 | 15056.7 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





