Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yccj family protein | ECS88_RS06175 | P0AB16 | Negative | 1056621 - 1056848 | 8524.89 |
| nad(p)h:quinone oxidoreductase | ECS88_RS06180 | A7ZKA9 | Negative | 1056869 - 1057465 | 20846.8 |
| general stress protein | ECS88_RS06190 | P56614 | Positive | 1057838 - 1058011 | 5883.55 |
| tail fiber assembly protein | ECS88_RS06195 | P75892 | Negative | 1058094 - 1059316 | 43035.8 |
| nadh-dependent fmn reductase rutf | ECS88_RS06200 | B7MIF4 | Negative | 1059337 - 1059831 | 17724.3 |
| malonic semialdehyde reductase | ECS88_RS06205 | B7MIF5 | Negative | 1059842 - 1060432 | 21626.6 |
| pyrimidine utilization protein d | ECS88_RS06210 | B7MIF6 | Negative | 1060442 - 1061242 | 28879.8 |
| 3-aminoacrylate deaminase | ECS88_RS06215 | C8U5H2 | Negative | 1061250 - 1061636 | 13763.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | ECS88_RS06220 | B7MIF8 | Negative | 1061648 - 1062340 | 25251.0 |
| pyrimidine utilization protein a | ECS88_RS06225 | B7UNZ5 | Negative | 1062340 - 1063431 | 39945.4 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





