Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ECS88_RS05720 | B7MHL0 | Positive | 956157 - 957305 | 41457.2 |
| pyruvate formate lyase 1-activating protein | ECS88_RS05725 | P0A9N6 | Negative | 957402 - 958142 | 28205.9 |
| formate c-acetyltransferase | ECS88_RS05730 | P09373 | Negative | 958334 - 960616 | 85362.0 |
| formate transporter foca | ECS88_RS05735 | P0AC25 | Negative | 960671 - 961528 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | ECS88_RS05740 | P75838 | Negative | 961934 - 963694 | 65684.0 |
| duf421 domain-containing protein | ECS88_RS05745 | P75839 | Positive | 963824 - 964516 | 26251.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | ECS88_RS05750 | B7MHL6 | Positive | 964715 - 965803 | 39774.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | ECS88_RS05755 | B7MHL7 | Positive | 965874 - 967157 | 46224.6 |
| metallopeptidase ycal | ECS88_RS05760 | P43674 | Positive | 967327 - 968091 | 26778.7 |
| (d)cmp kinase | ECS88_RS05765 | A7ZJZ9 | Positive | 968264 - 968947 | 24747.8 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





