Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cecr | ECS88_RS05145 | P0ACU0 | Negative | 832948 - 833619 | 24991.1 |
| atp-dependent rna helicase rhle | ECS88_RS05150 | P25888 | Positive | 833848 - 835209 | 50022.4 |
| tail fiber assembly protein | ECS88_RS05155 | Q323Z6 | Negative | 835442 - 835642 | 7413.01 |
| atp-dependent dna helicase ding | ECS88_RS05160 | Q8FJN1 | Positive | 835746 - 837896 | 81445.9 |
| dna-binding protein ybib | ECS88_RS05165 | P30177 | Positive | 837924 - 838886 | 35112.8 |
| hydroxycarboxylate dehydrogenase hcxb | ECS88_RS05170 | P58409 | Positive | 839027 - 840112 | 38860.3 |
| hypothetical protein | ECS88_RS27760 | Not Available | Positive | 840178 - 840237 | 2078.43 |
| duf1471 family protein ybij | ECS88_RS05175 | P0AAX4 | Negative | 840340 - 840600 | 8568.2 |
| c4-type zinc finger protein ybii | ECS88_RS05180 | P41039 | Negative | 840865 - 841131 | 9804.42 |
| pkhd-type hydroxylase ybix | ECS88_RS05185 | B7MGR2 | Negative | 841205 - 841882 | 25501.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





