Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antiterminator/rna stability regulator cspe | ECS88_RS04310 | P0A974 | Positive | 679773 - 679982 | 7463.84 |
| fluoride efflux transporter crcb | ECS88_RS04315 | A7ZJ12 | Negative | 680036 - 680419 | 13766.1 |
| deaminated glutathione amidase | ECS88_RS04320 | P58054 | Positive | 680515 - 681303 | 28650.0 |
| twin-arginine translocase subunit tate | ECS88_RS04325 | P0A845 | Positive | 681432 - 681635 | 7024.71 |
| lipoyl synthase | ECS88_RS04330 | A7ZJ15 | Negative | 681735 - 682700 | 36073.8 |
| tail fiber assembly protein | ECS88_RS27970 | P30979 | Negative | 682941 - 683260 | 12101.9 |
| lipoyl(octanoyl) transferase lipb | ECS88_RS04345 | A7ZJ18 | Negative | 683520 - 684161 | 23884.0 |
| duf493 family protein ybed | ECS88_RS04350 | A7ZJ19 | Negative | 684262 - 684525 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase daca | ECS88_RS04355 | P0AEB4 | Negative | 684635 - 685846 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | ECS88_RS04360 | P10100 | Negative | 685986 - 687074 | 37584.2 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





