Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | ECS88_RS02975 | P25539 | Positive | 437065 - 438168 | 40387.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | ECS88_RS02980 | B7MD73 | Positive | 438257 - 438727 | 16171.5 |
| transcription antitermination factor nusb | ECS88_RS02985 | A7ZIG9 | Positive | 438747 - 439166 | 15689.9 |
| thiamine-phosphate kinase | ECS88_RS02990 | P0AGG1 | Positive | 439244 - 440221 | 35072.8 |
| phosphatidylglycerophosphatase a | ECS88_RS02995 | P18200 | Positive | 440199 - 440717 | 19449.3 |
| 1-deoxyxylulose-5-phosphate synthase yajo | ECS88_RS03000 | P77735 | Negative | 440771 - 441745 | 36449.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ECS88_RS03005 | B7MD78 | Negative | 441800 - 443662 | 67606.9 |
| (2e,6e)-farnesyl diphosphate synthase | ECS88_RS03010 | P22939 | Negative | 443687 - 444586 | 32180.6 |
| exodeoxyribonuclease vii small subunit | ECS88_RS03015 | A7ZIH5 | Negative | 444586 - 444828 | 8952.42 |
| trna uracil 4-sulfurtransferase thii | ECS88_RS03020 | B7MD81 | Positive | 445034 - 446482 | 54963.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





