Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide resistance inhibitor ipra | ECS88_RS02770 | P0AAP6 | Positive | 398110 - 398733 | 23929.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | ECS88_RS02775 | P0AD71 | Negative | 398734 - 399891 | 41925.5 |
| peptide antibiotic transporter sbma | ECS88_RS02785 | P0AFY7 | Positive | 400243 - 401463 | 46447.9 |
| surface-exposed outer membrane lipoprotein yaiw | ECS88_RS02790 | P77562 | Positive | 401476 - 402570 | 40359.5 |
| yaiy family protein | ECS88_RS02795 | P0AAP9 | Negative | 402629 - 402937 | 11425.2 |
| duf2754 domain-containing protein | ECS88_RS27170 | P0AAQ1 | Positive | 403197 - 403409 | 8097.92 |
| d-alanine--d-alanine ligase | ECS88_RS02805 | Q8FKE3 | Negative | 403433 - 404527 | 39348.1 |
| tail fiber assembly protein | ECS88_RS27555 | Not Available | Positive | 404605 - 404807 | 7682.88 |
| anti-adapter protein irap | ECS88_RS02810 | B7UJK6 | Positive | 404989 - 405249 | 9966.07 |
| alkaline phosphatase | ECS88_RS02815 | P00634 | Positive | 405350 - 406765 | 49472.3 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





