Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
34503 bp
Thymine Count
33370 bp
Guanine Count
34203 bp
Cytosine Count
31777 bp
Genome Length
133853 bp
Protein-coding Genes
139 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | ECS88_RS00510 | Q99342 | Positive | 81718 - 82074 | 13856.9 |
| replication regulatory protein repa | ECS88_RS00515 | P62536 | Positive | 82164 - 82424 | 10052.4 |
| repa leader peptide tap | ECS88_RS28285 | P62550 | Positive | 82650 - 82724 | 2699.38 |
| incfii family plasmid replication initiator repa | ECS88_RS00530 | P03066 | Positive | 82717 - 83574 | 32801.7 |
| type ii toxin-antitoxin system antitoxin yaca | ECS88_RS00545 | Not Available | Positive | 84490 - 84759 | 10253.2 |
| type ii toxin-antitoxin system toxin yacb | ECS88_RS00550 | Not Available | Positive | 84759 - 85037 | 10763.0 |
| 3'-5' exonuclease | ECS88_RS00555 | P37414 | Positive | 85083 - 85931 | 30916.9 |
| colicin ia central receptor-binding domain-containing protein | ECS88_RS00560 | P06716 | Positive | 86117 - 87997 | 69433.9 |
| colicin 1a immunity protein | ECS88_RS00565 | P08701 | Negative | 88019 - 88354 | 13251.4 |
| integrase core domain-containing protein | ECS88_RS00575 | Not Available | Positive | 88483 - 88698 | 8446.65 |
Pathways
12520 pathways
Health Effects
No health effects information available for this bacterium.





