Methylovorus glucosetrophus SIP3-4

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylovorus

Description

This organism is able to utilize methylamines, potentially significant greenhouse gases, as a sole source of energy. This strain will be used for comparative analysis with other methylotrophs. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Nitrosomonadales
Family	Methylophilaceae
Genus	Methylovorus
Species	Methylovorus glucosotrophus
Strain	SIP3-4

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobic
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Methylotroph
Pathogenicity	Not Available

Genome Summary

Methylovorus glucosotrophus SIP3-4 plasmid pMsip02, complete

NC_012972.1 NC_012969.1

Gene Summary

Adenine Count

2487 bp

Thymine Count

2676 bp

Guanine Count

2301 bp

Cytosine Count

2352 bp

Genome Length

9816 bp

Protein-coding Genes

13 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
nacht domain-containing protein	MSIP34_RS11865	Not Available	Negative	2488161 - 2492519	160603.0
hypothetical protein	MSIP34_RS11870	Not Available	Negative	2492506 - 2496324	137821.0
membrane protein	MSIP34_RS11875	Not Available	Positive	2496966 - 2497724	27154.6
transporter	MSIP34_RS11880	Not Available	Positive	2497743 - 2498495	28069.0
response regulator transcription factor	MSIP34_RS11885	Not Available	Positive	2498509 - 2499174	24616.2
sensor histidine kinase	MSIP34_RS11890	Not Available	Positive	2499150 - 2500496	49822.1
higa family addiction module antitoxin	MSIP34_RS11895	Not Available	Negative	2500785 - 2501090	11477.9
type ii toxin-antitoxin system rele/pare family toxin	MSIP34_RS11900	Not Available	Negative	2501102 - 2501383	10835.9
type ii toxin-antitoxin system mqsa family antitoxin	MSIP34_RS15485	Not Available	Positive	2501642 - 2501833	6809.12
hypothetical protein	MSIP34_RS11905	Not Available	Negative	2501883 - 2502104	8308.74

Displaying genes 2411 – 2420 of 2881 in total

Pathways

1297 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Ornithine Metabolism

Proline Metabolism

Palmitate Biosynthesis

Fatty Acid Elongation (Saturated)

tRNA Charging

Show All 1297 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000553	biphenyl-2,3-diolC12H10O2	Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000989	GlycerolC3H8O3	`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001003	phthalateC8H4O4	Not available	Average164.117Da Monoisotopic164.0120558Da
BASm0001225	dodecanoateC12H23O2	Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001462	ubiquinone-0C9H10O4	`605-94-7`	Average182.1733Da Monoisotopic182.057908808Da
BASm0001639	CobinamideC48H72CoN11O8	`13497-85-3`	Average990.0874Da Monoisotopic989.4897335Da

Displaying 1–10 of 1687 metabolites

Health Effects

No health effects information available for this bacterium.