Methylovorus glucosetrophus SIP3-4

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylovorus

Description

This organism is able to utilize methylamines, potentially significant greenhouse gases, as a sole source of energy. This strain will be used for comparative analysis with other methylotrophs. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Nitrosomonadales
Family	Methylophilaceae
Genus	Methylovorus
Species	Methylovorus glucosotrophus
Strain	SIP3-4

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobic
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Methylotroph
Pathogenicity	Not Available

Genome Summary

Methylovorus glucosotrophus SIP3-4 plasmid pMsip02, complete

NC_012972.1 NC_012969.1

Gene Summary

Adenine Count

2487 bp

Thymine Count

2676 bp

Guanine Count

2301 bp

Cytosine Count

2352 bp

Genome Length

9816 bp

Protein-coding Genes

13 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
tonb-dependent receptor family protein	MSIP34_RS00590	Not Available	Positive	125105 - 127408	83189.5
5-(hydroxymethyl)furfural oxidase	MSIP34_RS00595	Not Available	Positive	127488 - 129083	56968.5
aldehyde dehydrogenase family protein	MSIP34_RS00600	Not Available	Positive	129094 - 130503	49937.5
mfs transporter	MSIP34_RS00605	Not Available	Positive	130550 - 131743	41741.3
peroxiredoxin	MSIP34_RS00610	Not Available	Negative	131810 - 132451	23525.0
abc transporter substrate-binding protein	MSIP34_RS00615	Not Available	Negative	132567 - 133592	37388.0
abc transporter atp-binding protein	MSIP34_RS00620	Not Available	Negative	133791 - 135650	68551.5
abc transporter atp-binding protein	MSIP34_RS00625	Not Available	Negative	135643 - 137427	65009.2
tonb-dependent receptor	MSIP34_RS00630	Not Available	Negative	137497 - 139944	88640.2
class ii aldolase/adducin family protein	MSIP34_RS00640	Not Available	Positive	140448 - 141140	25398.2

Displaying genes 191 – 200 of 2881 in total

Pathways

1426 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Ornithine Metabolism

Proline Metabolism

Palmitate Biosynthesis

Fatty Acid Elongation (Saturated)

tRNA Charging

Show All 1426 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000553	biphenyl-2,3-diolC12H10O2	Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000989	GlycerolC3H8O3	`56-81-5`	Average92.0938Da Monoisotopic92.04734412Da
BASm0001003	phthalateC8H4O4	Not available	Average164.117Da Monoisotopic164.0120558Da
BASm0001225	dodecanoateC12H23O2	Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001462	ubiquinone-0C9H10O4	`605-94-7`	Average182.1733Da Monoisotopic182.057908808Da
BASm0001639	CobinamideC48H72CoN11O8	`13497-85-3`	Average990.0874Da Monoisotopic989.4897335Da

Displaying 1–10 of 1687 metabolites

Health Effects

No health effects information available for this bacterium.