Microbacterium azadirachtae

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium azadirachtae is a Gram-positive, aerobic, rod-shaped bacterium that has been characterized by its non-spore-forming nature and optimal growth temperature of 29.0°C. This microbe is notable for its resilience in aerobic environments, where it presumably engages in metabolic processes that require oxygen. The rod shape of M. azadirachtae suggests a structural adaptation that may facilitate nutrient absorption and motility in its ecological niche. Its Gram-positive nature indicates a thick peptidoglycan layer in the cell wall, which may contribute to its stability and ability to withstand environmental stresses. Although specific ecological roles are not detailed in the available data, the growth temperature of 29.0°C suggests that M. azadirachtae may thrive in warm environments, possibly those associated with decaying organic matter or agricultural systems. This temperature preference could also indicate a potential association with tropical or subtropical ecosystems, particularly given its name, which references the neem tree (Azadirachta indica), a plant known for its diverse biological interactions. The unique combination of traits exhibited by Microbacterium azadirachtae underscores its potential importance in nutrient cycling and its adaptability to specific environmental conditions, warranting further exploration of its ecological roles and potential applications in biotechnology or agriculture.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium azadirachtae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatmaize rhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium azadirachtae strain DSM 23848 RL72_contig000086,

Gene Summary

Adenine Count

596284 bp

Thymine Count

596700 bp

Guanine Count

1422215 bp

Cytosine Count

1422387 bp

Genome Length

4037586 bp

Protein-coding Genes

3749 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hth-type transcriptional repressor yvoaRL72_01763Not AvailableNegative1883443 - 188419828011.1
serine/threonine exchanger stetRL72_01764O59942Positive1884280 - 188576452927.6
l-2-hydroxyglutarate oxidase lhgoRL72_01765A0A011QK89Positive1885795 - 188695240271.8
glycerol kinaseRL72_01766Q5P212Positive1887016 - 188843150159.1
enamine/imine deaminaseRL72_01767Not AvailablePositive1888454 - 188883113219.8
putrescine oxidaseRL72_01768Not AvailablePositive1889046 - 189105872146.1
eama-like transporter family proteinRL72_01769Not AvailablePositive1891223 - 189206228654.5
esterase phb depolymeraseRL72_01770P12625Positive1892355 - 189363243702.1
2,2-dialkylglycine decarboxylaseRL72_01771Q7SY54Negative1893697 - 189421518336.1
acetylornithine aminotransferaseRL72_01772Q9VU95Negative1894246 - 18945098844.67

Displaying genes 1761 – 1770 of 7757 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

260 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 260 metabolites

Health Effects

No health effects information available for this bacterium.