Oceanibaculum pacificum str. MCCC 1A02656

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Oceanibaculaceae

Genus

Oceanibaculum

Description

Oceanibaculum pacificum strain MCCC 1A02656 is a Gram-negative, rod-shaped bacterium that demonstrates optimal growth at a temperature of 32.0°C. This strain has been classified within the genus Oceanibaculum, which typically encompasses marine microorganisms adapted to various oceanic environments. As a Gram-negative organism, Oceanibaculum pacificum possesses a characteristic outer membrane containing lipopolysaccharides, which can influence its interactions with the surrounding environment, including its susceptibility to antibiotics and its role in biofilm formation. The rod shape of this bacterium may contribute to its motility and ability to colonize diverse niches within marine habitats. The optimal growth temperature of 32.0°C suggests that Oceanibaculum pacificum is well-suited to thrive in moderately warm aquatic environments, potentially within coastal regions or estuarine systems where water temperatures often stabilize around this range. This temperature preference indicates a possible adaptation to specific ecological conditions that may foster its growth and metabolic activities. In summary, Oceanibaculum pacificum str. MCCC 1A02656 exemplifies a marine bacterium adapted to a moderate thermal environment, potentially playing a role in nutrient cycling or microbial diversity within its ecological niche. Its Gram-negative nature and rod-shaped morphology may further facilitate its adaptation and functional roles in marine ecosystems, highlighting the importance of such microorganisms in maintaining oceanic health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyOceanibaculaceae
GenusOceanibaculum
SpeciesOceanibaculum pacificum
StrainMCCC 1A02656

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanibaculum pacificum strain MCCC 1A02656 contig99, whole genome

Gene Summary

Adenine Count

667426 bp

Thymine Count

667673 bp

Guanine Count

1281857 bp

Cytosine Count

1274478 bp

Genome Length

3891434 bp

Protein-coding Genes

3525 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAUP43_17120Not AvailableNegative778054 - 77916938985.9
hypothetical proteinAUP43_17125Not AvailableNegative779172 - 78024838919.2
thiol oxidoreductaseAUP43_17130Not AvailableNegative780259 - 78169852100.7
peptidaseAUP43_17135Not AvailableNegative781828 - 78310545413.2
nad-dependent epimeraseAUP43_17140Not AvailablePositive783315 - 78432537258.6
erythromycin biosynthesis sensory transduction protein eryc1AUP43_17145Not AvailablePositive784354 - 78546939285.4
hypothetical proteinAUP43_05040Not AvailablePositive786040 - 78819077014.5
lexa family transcriptional regulatorAUP43_05045Not AvailableNegative788187 - 78892126651.2
rna polymerase subunit sigmaAUP43_05050Not AvailablePositive789211 - 78975920123.2
anti-sigma factorAUP43_05055Not AvailablePositive789756 - 79048725588.7

Displaying genes 771 – 780 of 3611 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.