Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Oceanibaculaceae
Genus
Oceanibaculum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Oceanibaculaceae |
| Genus | Oceanibaculum |
| Species | Oceanibaculum pacificum |
| Strain | MCCC 1A02656 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
667426 bp
Thymine Count
667673 bp
Guanine Count
1281857 bp
Cytosine Count
1274478 bp
Genome Length
3891434 bp
Protein-coding Genes
3525 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | AUP43_13645 | Not Available | Positive | 3405567 - 3406763 | 41195.9 |
| nudix hydrolase | AUP43_13650 | Not Available | Positive | 3407204 - 3407767 | 20945.8 |
| mfs transporter | AUP43_13655 | Not Available | Positive | 3407772 - 3409067 | 45562.9 |
| ribulose phosphate epimerase | AUP43_13660 | Not Available | Positive | 3409086 - 3409748 | 23260.0 |
| hypothetical protein | AUP43_13665 | Not Available | Positive | 3409752 - 3411401 | 59909.3 |
| hypothetical protein | AUP43_13670 | Not Available | Positive | 3411407 - 3412387 | 34087.9 |
| hypothetical protein | AUP43_13675 | Not Available | Positive | 3412419 - 3413327 | 32038.8 |
| nucleotide sugar dehydratase | AUP43_13680 | Not Available | Positive | 3413420 - 3415348 | 71093.1 |
| rna polymerase subunit sigma-54 | AUP43_13685 | Not Available | Positive | 3415382 - 3416269 | 32072.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | AUP43_13690 | Not Available | Positive | 3416361 - 3417947 | 54986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
