Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodospirillales
Family
Oceanibaculaceae
Genus
Oceanibaculum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodospirillales |
| Family | Oceanibaculaceae |
| Genus | Oceanibaculum |
| Species | Oceanibaculum pacificum |
| Strain | MCCC 1A02656 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
667426 bp
Thymine Count
667673 bp
Guanine Count
1281857 bp
Cytosine Count
1274478 bp
Genome Length
3891434 bp
Protein-coding Genes
3525 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AUP43_09325 | Not Available | Positive | 2196985 - 2197782 | 29580.4 |
| acetylornithine deacetylase | AUP43_09330 | Not Available | Positive | 2197883 - 2199055 | 42507.2 |
| signal recognition particle-docking protein ftsy | AUP43_09335 | Not Available | Negative | 2199063 - 2200028 | 33928.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | AUP43_09340 | Not Available | Negative | 2200025 - 2201284 | 46308.9 |
| diaminopimelate epimerase | AUP43_09345 | Not Available | Negative | 2201284 - 2202120 | 29505.8 |
| cold-shock protein | AUP43_09350 | Not Available | Positive | 2202505 - 2202714 | 7641.07 |
| hypothetical protein | AUP43_09355 | Not Available | Positive | 2202795 - 2202980 | 7017.98 |
| hypothetical protein | AUP43_09360 | Not Available | Positive | 2203092 - 2203322 | 8402.99 |
| rna-binding protein | AUP43_09365 | Not Available | Positive | 2203556 - 2205031 | 52143.8 |
| 30s ribosomal protein s16 | AUP43_09370 | Not Available | Positive | 2205079 - 2205576 | 17338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
