Vibrio cholerae M66-2

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio species represent a significant portion of the culturable heterotrophic bacteria of oceans, coastal waters and estuaries. Various species of this genus are devastating pathogens for finfish, shellfish and mammals. A Gram-negative, rod-shaped bacterium, V.cholerae is the etiological agent of cholera, a severe diarrheal disease that occurs most frequently in epidemic form. Cholera has been epidemic in southern Asia for at least 1000 years; epidemics are usually associated with poor sanitary conditions. Vibrio cholerae as a species includes both pathogenic and non pathogenic strains that vary in their virulence and gene content. There are 2 major serogroups that cause epidemic cholera, O1 and O139. Serogroup O1 is further classified into two biotypes, classical and El Tor, and into two major serotypes, Inaba and Ogawa.Cholera outbreaks are unique in that the date and place of the occurrence, and in some cases the causative strain, are known. The first 6 pandemics (1817 to 1923) were caused by classical strains, however the 7th, which erupted in 1961, was caused by the hitherto mild El Tor strain. Strain M66-2 is a 1937 Makassar outbreak isolate, which appears to be on the direct line to the 7th pandemic. Comparison of the 6th pandemic O395 strain with M66-2 and the 7th pandemic strain (El Tor Inaba N16961) shows that the 2 pandemic clones gained pandemic potential independently, and overall there were 29 insertions or deletions of one or more genes. The divergence date of the 6th and 7th pandemic clones is estimated to be about 1880 (adapted from 19115014). (HAMAP: VIBCM)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainM66-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae M66-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Vibrio cholerae M66-2 chromosome I, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2505 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
comf family proteinVCM66_RS19960Not AvailablePositive2830907 - 283176732547.2
fe-s biogenesis protein nfuaVCM66_RS13035Not AvailablePositive2831855 - 283244221107.8
adp compounds hydrolase nudeVCM66_RS13040Not AvailablePositive2832581 - 283312920513.7
3'(2'),5'-bisphosphate nucleotidase cysqVCM66_RS13045Not AvailablePositive2833152 - 283397930376.0
type ii secretion system protein nVCM66_RS13050Not AvailableNegative2834031 - 283478927355.8
type ii secretion system protein mVCM66_RS13055Not AvailableNegative2834791 - 283528818652.6
type ii secretion system protein gsplVCM66_RS13060Not AvailableNegative2835298 - 283650945379.2
type ii secretion system minor pseudopilin gspkVCM66_RS13065Not AvailableNegative2836478 - 283748837603.7
type ii secretion system minor pseudopilin gspjVCM66_RS13070Not AvailableNegative2837478 - 283814325261.1
type ii secretion system minor pseudopilin gspiVCM66_RS13075Not AvailableNegative2838130 - 283848312837.7

Displaying genes 2561 – 2570 of 3593 in total

Metabolites

220 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 1–10 of 220 metabolites

Health Effects

No health effects information available for this bacterium.