Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Polynucleobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Polynucleobacter |
| Species | Polynucleobacter asymbioticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water; small acidic pond |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651409 bp
Thymine Count
651349 bp
Guanine Count
524960 bp
Cytosine Count
527672 bp
Genome Length
2355392 bp
Protein-coding Genes
2312 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | A4F89_RS03975 | Not Available | Negative | 778255 - 779925 | 63375.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | A4F89_RS03980 | Not Available | Positive | 780069 - 780899 | 30461.0 |
| dctp deaminase | A4F89_RS03985 | Not Available | Positive | 780952 - 781518 | 20961.9 |
| ion channel | A4F89_RS03990 | Not Available | Positive | 781532 - 782446 | 33972.5 |
| arginine/lysine/ornithine decarboxylase | A4F89_RS03995 | Not Available | Positive | 782443 - 784710 | 85614.2 |
| aspartate 1-decarboxylase | A4F89_RS04000 | Not Available | Positive | 784727 - 785089 | 13233.0 |
| trap transporter large permease | A4F89_RS04005 | Not Available | Negative | 785103 - 786635 | 55253.3 |
| trap transporter small permease subunit | A4F89_RS04010 | Not Available | Negative | 786632 - 787183 | 20956.8 |
| argininosuccinate lyase | A4F89_RS04015 | Not Available | Negative | 787189 - 788607 | 52048.4 |
| hydroxymethylbilane synthase | A4F89_RS04020 | Not Available | Positive | 788663 - 789628 | 34690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
