Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Polynucleobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Polynucleobacter |
| Species | Polynucleobacter asymbioticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water; small acidic pond |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651409 bp
Thymine Count
651349 bp
Guanine Count
524960 bp
Cytosine Count
527672 bp
Genome Length
2355392 bp
Protein-coding Genes
2312 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | A4F89_RS10220 | Not Available | Negative | 2035781 - 2037040 | 46131.0 |
| m20 aminoacylase family protein | A4F89_RS10225 | Not Available | Negative | 2037293 - 2038462 | 41752.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | A4F89_RS10230 | Not Available | Negative | 2038475 - 2039461 | 35052.8 |
| lysr family transcriptional regulator | A4F89_RS10235 | Not Available | Positive | 2039574 - 2040515 | 35073.9 |
| porin | A4F89_RS10240 | Not Available | Negative | 2040547 - 2041776 | 42531.2 |
| mfs transporter | A4F89_RS10245 | Not Available | Negative | 2041985 - 2043295 | 47145.1 |
| 3-oxoadipate enol-lactonase | A4F89_RS10250 | Not Available | Negative | 2043298 - 2044101 | 29325.8 |
| 3-oxoadipyl-coa thiolase | A4F89_RS10255 | Not Available | Negative | 2044110 - 2045318 | 42232.1 |
| 3-oxoacid coa-transferase subunit b | A4F89_RS10260 | Not Available | Negative | 2045315 - 2045965 | 23105.8 |
| 3-oxoacid coa-transferase subunit a | A4F89_RS10265 | Not Available | Negative | 2045968 - 2046636 | 23698.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
