Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Polynucleobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Polynucleobacter |
| Species | Polynucleobacter asymbioticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water; small acidic pond |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651409 bp
Thymine Count
651349 bp
Guanine Count
524960 bp
Cytosine Count
527672 bp
Genome Length
2355392 bp
Protein-coding Genes
2312 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A4F89_RS08390 | Not Available | Positive | 1676614 - 1677441 | 29295.0 |
| succinyl-diaminopimelate desuccinylase | A4F89_RS08395 | Not Available | Positive | 1677452 - 1678603 | 41607.7 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | A4F89_RS08400 | Not Available | Positive | 1678641 - 1679537 | 32462.6 |
| dna repair protein rada | A4F89_RS08405 | Not Available | Negative | 1679550 - 1680914 | 48264.0 |
| hypothetical protein | A4F89_RS08410 | Not Available | Negative | 1680969 - 1681478 | 19557.8 |
| potassium transporter kup | A4F89_RS08415 | Not Available | Negative | 1681475 - 1683316 | 68187.4 |
| hypothetical protein | A4F89_RS12175 | Not Available | Positive | 1683315 - 1683476 | 5780.13 |
| Trna-met | Not Available | Not Available | Positive | 1683573 - 1683649 | Not Available |
| glycine zipper family protein | A4F89_RS08425 | Not Available | Negative | 1683747 - 1684118 | 12022.5 |
| dna internalization-related competence protein comec/rec2 | A4F89_RS08430 | Not Available | Negative | 1684132 - 1686606 | 92901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
