Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Polynucleobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Polynucleobacter |
| Species | Polynucleobacter asymbioticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water; small acidic pond |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
651409 bp
Thymine Count
651349 bp
Guanine Count
524960 bp
Cytosine Count
527672 bp
Genome Length
2355392 bp
Protein-coding Genes
2312 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | A4F89_RS07535 | Not Available | Negative | 1507184 - 1508512 | 49049.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | A4F89_RS07540 | Not Available | Negative | 1508537 - 1509808 | 45377.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | A4F89_RS07545 | Not Available | Negative | 1509822 - 1511030 | 44853.9 |
| nucleoside-diphosphate kinase | A4F89_RS07550 | Not Available | Negative | 1511065 - 1511490 | 15390.5 |
| bax inhibitor-1 family protein | A4F89_RS07555 | Not Available | Positive | 1511771 - 1512472 | 24921.4 |
| hypothetical protein | A4F89_RS12360 | Not Available | Negative | 1512566 - 1512697 | 4812.89 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | A4F89_RS07560 | Not Available | Negative | 1512804 - 1514234 | 53176.7 |
| 3'-5' exonuclease | A4F89_RS07565 | Not Available | Negative | 1514227 - 1515048 | 31128.1 |
| peptidoglycan dd-metalloendopeptidase family protein | A4F89_RS07570 | Not Available | Negative | 1515055 - 1515846 | 28201.9 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | A4F89_RS07575 | Not Available | Negative | 1515864 - 1516487 | 22444.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
