Nocardioides caeni str. DSM 23134

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides caeni strain DSM 23134 is a Gram-positive, aerobic bacterium characterized by its rod-shaped morphology and non-spore-forming nature. This microbe thrives optimally at a temperature of 29.0°C, indicating a preference for moderately warm environments. As a member of the Nocardioides genus, it may play a role in various ecological processes, particularly in the degradation of organic materials in soil or aquatic environments. The Gram-positive nature of N. caeni suggests a robust cell wall structure composed primarily of peptidoglycan, which may confer certain advantages in its ecological niche, such as resilience to environmental stressors. Although specific ecological interactions of this strain are not detailed, its aerobic metabolism implies that it requires oxygen for growth and may contribute to biogeochemical cycles, particularly in aerobic environments where organic matter decomposition occurs. Understanding the traits of Nocardioides caeni provides insights into its potential role in microbial communities, specifically in relation to organic matter turnover and nutrient cycling. These characteristics underscore the importance of such bacteria in maintaining ecosystem health and functionality, as they may facilitate the breakdown of complex organic compounds in diverse habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides caeni
StrainDSM 23134

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides caeni strain DSM 23134 scaffold2127_370.0_length_537,

Gene Summary

Adenine Count

583505 bp

Thymine Count

586100 bp

Guanine Count

1446924 bp

Cytosine Count

1454256 bp

Genome Length

4075875 bp

Protein-coding Genes

3779 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseE9934_12555Not AvailableNegative2565037 - 256570524404.6
citrate synthase 2E9934_12560Not AvailablePositive2565791 - 256689439934.3
hypothetical proteinE9934_12565Not AvailableNegative2567037 - 256763622109.7
trypsin-like peptidase domain-containing proteinE9934_12570Not AvailablePositive2567823 - 256925650284.0
plp-dependent aminotransferase family proteinE9934_12575Not AvailableNegative2569328 - 257065647408.0
pyridoxamine 5'-phosphate oxidase family proteinE9934_12580Not AvailablePositive2570725 - 257141423879.7
gnat family n-acetyltransferaseE9934_12585Not AvailableNegative2571424 - 257192717791.1
phosphoserine transaminaseE9934_12590Not AvailablePositive2572046 - 257316439616.6
hypothetical proteinE9934_12595Not AvailableNegative2573190 - 257348310487.7
sdr family oxidoreductaseE9934_12600Not AvailableNegative2573641 - 257442026783.2

Displaying genes 2481 – 2490 of 3828 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.