Acetohalobium arabaticum DSM 5501

Gram-positiveBacilliMotileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halobacteroidaceae

Genus

Acetohalobium

Description

Acetohalobium arabaticum (strainA TCC 49924 / DSM 5501 / Z-7288) is an obligate halophile, acetogenic, Gram-positive bacterium isolated from lagoons of the Arabat spit (East Crimea) which separates Sivash lake from the Sea of Azov. It produces acetate by reducing CO2. Growth is completely inhibited by 100 uM/ml streptomycin, benzylpenicillin, bacitracin, erythromycin, gentamycin, kanamycin, vancomycin or tetracyclin. It is an obligately anaerobe tolerating up to 12 mM H2S. Neither O2, S2O3 SO4, nor S0 can serve as electron acceptors. A. arabaticum requires a salt concentration of 10-25% NaCl and the optimum is 15-18% NaCl. The optimal pH is between 7.6 and 8.0. A. arabaticum exhibits three modes of nutrition: It is chemolithoautotrophic using H2 together with CO2 or CO; it is methylotrophic using trimethylamine (TMA); and it is organotrophic using betaine, lactate, pyruvate or histidine. (Adapted from: PMID 21304692). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalobacteroidaceae
GenusAcetohalobium
SpeciesAcetohalobium arabaticum
StrainDSM 5501

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Acetohalobium arabaticum DSM 5501
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithotroph- Methylotroph- Organotroph
PathogenicityNo

Genome Summary

Acetohalobium arabaticum DSM 5501, complete sequence.

Gene Summary

Adenine Count

785061 bp

Thymine Count

779890 bp

Guanine Count

455625 bp

Cytosine Count

449020 bp

Genome Length

2469596 bp

Protein-coding Genes

2342 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock proteinacear_RS09700Not AvailablePositive1991224 - 19914247471.52
cold-shock proteinacear_RS09705Not AvailablePositive1991479 - 19916827674.8
indolepyruvate oxidoreductase subunit betaacear_RS09710Not AvailableNegative1991812 - 199238720709.8
indolepyruvate ferredoxin oxidoreductase subunit alphaacear_RS09715Not AvailableNegative1992380 - 199413763791.2
flavin reductase family proteinacear_RS09720Not AvailableNegative1994356 - 199485919160.5
4-oxalocrotonate tautomerase dmpiacear_RS09725Not AvailableNegative1994871 - 19950627026.47
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlacear_RS09730Not AvailableNegative1995152 - 199561017585.8
duf523 domain-containing proteinacear_RS09735Not AvailableNegative1995638 - 199609316353.5
mtap family purine nucleoside phosphorylaseacear_RS09740Not AvailableNegative1996114 - 199695931620.5
3-deoxy-7-phosphoheptulonate synthaseacear_RS09745Not AvailableNegative1997060 - 199787229381.2

Displaying genes 1971 – 1980 of 2428 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.