Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Candidatus Nanopelagicales
Family
Candidatus Nanopelagicaceae
Genus
Candidatus Planktophila
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Candidatus Nanopelagicales |
| Family | Candidatus Nanopelagicaceae |
| Genus | Candidatus Planktophila |
| Species | Candidatus Planktophila limnetica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
1348 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | PHILAsVB114_RS06020 | Not Available | Negative | 1143192 - 1144541 | 47499.0 |
| sos response-associated peptidase | PHILAsVB114_RS06025 | Not Available | Positive | 1144573 - 1145304 | 27298.3 |
| sigma-70 family rna polymerase sigma factor | PHILAsVB114_RS06030 | Not Available | Positive | 1145353 - 1145976 | 23429.2 |
| anti-sigma factor family protein | PHILAsVB114_RS06035 | Not Available | Positive | 1145973 - 1146374 | 15211.8 |
| thioesterase family protein | PHILAsVB114_RS06040 | Not Available | Positive | 1146380 - 1146799 | 14424.3 |
| superoxide dismutase, ni | PHILAsVB114_RS06045 | Not Available | Negative | 1146789 - 1147181 | 14512.3 |
| nickel-type superoxide dismutase maturation protease | PHILAsVB114_RS06960 | Not Available | Positive | 1147253 - 1147576 | 12024.4 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | PHILAsVB114_RS06055 | Not Available | Negative | 1147566 - 1151312 | 137490.0 |
| sdr family nad(p)-dependent oxidoreductase | PHILAsVB114_RS06060 | Not Available | Positive | 1151478 - 1152224 | 26594.7 |
| hypothetical protein | PHILAsVB114_RS06065 | Not Available | Negative | 1152233 - 1152802 | 21277.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.