Leeuwenhoekiella palythoae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Leeuwenhoekiella

Description

Leeuwenhoekiella palythoae is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism. This microbe thrives at an optimal growth temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the microbial community, L. palythoae’s aerobic nature suggests that it plays a role in environments where oxygen is readily available, potentially contributing to the degradation of organic matter or participating in nutrient cycling. The rod shape of L. palythoae may facilitate its movement and colonization within its ecological niche, allowing it to adapt to various microenvironments. The Gram-negative cell wall structure is indicative of its cellular composition, which may influence its interactions with other microorganisms and its resilience to certain environmental stresses. While specific ecological roles and interactions are not detailed, L. palythoae's characteristics may point towards a function within aquatic or soil ecosystems where oxygen is present. This bacterium could be involved in processes such as the decomposition of organic materials or the cycling of nutrients, contributing to the overall health and balance of its habitat. Understanding the ecological implications of L. palythoae's traits could provide insights into the dynamics of microbial communities in similar environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLeeuwenhoekiella
SpeciesLeeuwenhoekiella palythoae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leeuwenhoekiella palythoae strain DSM 19859 genome assembly,

Gene Summary

Adenine Count

1212645 bp

Thymine Count

1205719 bp

Guanine Count

802149 bp

Cytosine Count

804112 bp

Genome Length

4029999 bp

Protein-coding Genes

3392 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04487999_2710Not AvailableNegative3185522 - 318619323944.1
2-dehydro-3-deoxygluconokinaseSAMN04487999_2711Not AvailableNegative3186205 - 318721836782.9
d-glucuronate isomeraseSAMN04487999_2712Not AvailableNegative3187225 - 318864954092.0
2-deoxy-d-gluconate 3-dehydrogenaseSAMN04487999_2713Not AvailableNegative3188674 - 318943526763.8
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseSAMN04487999_2714Not AvailableNegative3189437 - 319027031772.6
protein of unknown functionSAMN04487999_2715Not AvailableNegative3190431 - 319143537368.5
unsaturated rhamnogalacturonyl hydrolaseSAMN04487999_2716Not AvailableNegative3191456 - 319268246771.9
fasciclin domain-containing proteinSAMN04487999_2717Not AvailablePositive3193214 - 319544883640.6
tonb-linked outer membrane protein, susc/raga familySAMN04487999_2718Not AvailablePositive3195450 - 3198728122181.0
starch-binding associating with outer membraneSAMN04487999_2719Not AvailablePositive3198746 - 320023956351.2

Displaying genes 2691 – 2700 of 3435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.