Leeuwenhoekiella palythoae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Leeuwenhoekiella

Description

Leeuwenhoekiella palythoae is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism. This microbe thrives at an optimal growth temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the microbial community, L. palythoae’s aerobic nature suggests that it plays a role in environments where oxygen is readily available, potentially contributing to the degradation of organic matter or participating in nutrient cycling. The rod shape of L. palythoae may facilitate its movement and colonization within its ecological niche, allowing it to adapt to various microenvironments. The Gram-negative cell wall structure is indicative of its cellular composition, which may influence its interactions with other microorganisms and its resilience to certain environmental stresses. While specific ecological roles and interactions are not detailed, L. palythoae's characteristics may point towards a function within aquatic or soil ecosystems where oxygen is present. This bacterium could be involved in processes such as the decomposition of organic materials or the cycling of nutrients, contributing to the overall health and balance of its habitat. Understanding the ecological implications of L. palythoae's traits could provide insights into the dynamics of microbial communities in similar environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusLeeuwenhoekiella
SpeciesLeeuwenhoekiella palythoae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leeuwenhoekiella palythoae strain DSM 19859 genome assembly,

Gene Summary

Adenine Count

1212645 bp

Thymine Count

1205719 bp

Guanine Count

802149 bp

Cytosine Count

804112 bp

Genome Length

4029999 bp

Protein-coding Genes

3392 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein ompaSAMN04487999_1006Not AvailableNegative1195749 - 119719751786.9
outer membrane protein ompaSAMN04487999_1007Not AvailableNegative1197288 - 119866449361.4
atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains)SAMN04487999_1008Not AvailableNegative1198917 - 1202060120806.0
superoxide dismutase, fe-mn familySAMN04487999_1009Not AvailablePositive1202240 - 120284822325.0
hypothetical proteinSAMN04487999_1010Not AvailableNegative1203123 - 12033086984.47
amidophosphoribosyltransferaseSAMN04487999_1011Not AvailableNegative1203413 - 120531172146.7
sugar or nucleoside kinase, ribokinase familySAMN04487999_1012Not AvailableNegative1205366 - 120628933977.1
ribonuclease hiSAMN04487999_1013Not AvailableNegative1206435 - 120707023880.5
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferaseSAMN04487999_1014Not AvailableNegative1207127 - 120769620844.1
acyl carrier proteinSAMN04487999_1015Not AvailablePositive1207874 - 12081078419.77

Displaying genes 1001 – 1010 of 3435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.