Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate reductoisomeraseFMEAI12_2450008Not AvailablePositive1002655 - 100389643127.8
zinc metalloprotease rip1FMEAI12_2450009Not AvailablePositive1003896 - 100507741779.7
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase)FMEAI12_2450010Not AvailablePositive1005277 - 100643140272.7
gcn5-related n-acetyltransferaseFMEAI12_2450011Not AvailablePositive1006448 - 100729930182.3
nitrate/sulfonate/bicarbonate family abc transporter, membrane ligand-binding proteinFMEAI12_2450012Not AvailablePositive1007561 - 100863437139.2
abc-type (atp-binding cassette-type) atpaseFMEAI12_2450013Not AvailablePositive1008865 - 100962627566.4
abc-type nitrate/sulfonate/bicarbonate transport system, permease componentFMEAI12_2450014Not AvailablePositive1009616 - 101070137635.6
transcriptional regulator, badm/rrf2 familyFMEAI12_2450015Not AvailablePositive1010796 - 101126016777.1
had-superfamily hydrolase, subfamily ia, variant 3FMEAI12_2450016Not AvailablePositive1011272 - 101229134910.6
conserved hypothetical proteinFMEAI12_2450017Not AvailableNegative1012390 - 101284814951.9

Displaying genes 961 – 970 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.