Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein eFMEAI12_5150032Not AvailablePositive6232621 - 623421954971.1
type ii secretion system proteinFMEAI12_5150033Not AvailablePositive6234216 - 623578153082.1
conserved hypothetical proteinFMEAI12_5150034Not AvailablePositive6235973 - 62362279217.23
tade family proteinFMEAI12_5150035Not AvailablePositive6236238 - 623664814034.8
conserved hypothetical proteinFMEAI12_5150036Not AvailableNegative6237154 - 623820333985.4
dead/deah box helicase domain proteinFMEAI12_5150037Not AvailableNegative6238312 - 624075386788.0
hypothetical proteinFMEAI12_5150038Not AvailableNegative6240809 - 62409314497.5
anti-sigma-b factor antagonistFMEAI12_5150039Not AvailablePositive6241080 - 624142112312.0
putative anti-sigma regulatory factor, serine/threonine protein kinaseFMEAI12_5150040Not AvailablePositive6241458 - 624206019896.4
k(+)-insensitive pyrophosphate-energized proton pumpFMEAI12_5150041Not AvailablePositive6242718 - 624507878925.4

Displaying genes 5911 – 5920 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.