Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease proteolytic subunit 4FMEAI12_2050007Not AvailableNegative550876 - 55159825627.3
transcriptional regulator, merr familyFMEAI12_2050008Not AvailableNegative551844 - 55230217181.5
transcriptional regulator, merr familyFMEAI12_2050009Not AvailableNegative552492 - 55294717294.7
nudix hydrolaseFMEAI12_2050010Not AvailablePositive553536 - 55441729725.3
conserved membrane hypothetical proteinFMEAI12_2060002Not AvailablePositive557388 - 55839535762.4
hypothetical proteinFMEAI12_2060003Not AvailableNegative558510 - 55915422089.7
regulatory protein lysr (fragment)FMEAI12_2060004Not AvailablePositive559212 - 56035141265.0
conserved exported hypothetical proteinFMEAI12_2060005Not AvailableNegative560323 - 56162146573.8
conserved hypothetical proteinFMEAI12_2060006Not AvailableNegative561631 - 56267136508.0
conserved hypothetical proteinFMEAI12_2060007Not AvailableNegative562668 - 56419151644.3

Displaying genes 551 – 560 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.