Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleic acid binding ob-fold trna/helicase-typeFMEAI12_4920024Not AvailableNegative5812280 - 581266613901.4
conserved hypothetical proteinFMEAI12_4920025Not AvailableNegative5812948 - 581363724509.0
deoxyuridine 5'-triphosphate nucleotidohydrolaseFMEAI12_4920026Not AvailableNegative5813618 - 581431323442.7
conserved hypothetical proteinFMEAI12_4920027Not AvailablePositive5814518 - 581482610324.3
conserved hypothetical proteinFMEAI12_4920028Not AvailableNegative5814938 - 581545618074.9
rna polymerase, sigma-24 subunit, ecf subfamily (fragment)FMEAI12_4920029Not AvailableNegative5815544 - 581626924960.0
major facilitator superfamily mfs_1 (fragment)FMEAI12_4930001Not AvailablePositive5816287 - 581753141035.1
transcriptional regulator, tetr familyFMEAI12_4930002Not AvailablePositive5817537 - 581812421195.2
glutathione-independent formaldehyde dehydrogenaseFMEAI12_4930003Not AvailableNegative5818225 - 581936140433.8
conserved hypothetical proteinFMEAI12_4930004Not AvailableNegative5819367 - 581968111491.2

Displaying genes 5501 – 5510 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.