Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseFMEAI12_4330021Not AvailableNegative4782124 - 478323938896.1
shikimate kinaseFMEAI12_4330022Not AvailableNegative4783239 - 478380219082.9
chorismate synthaseFMEAI12_4330023Not AvailableNegative4783805 - 478498941221.5
peptidase a24a prepilin type ivFMEAI12_4330024Not AvailableNegative4785048 - 478571622713.6
shikimate dehydrogenaseFMEAI12_4330025Not AvailableNegative4785764 - 478666030431.8
aminodeoxychorismate lyaseFMEAI12_4330026Not AvailableNegative4786663 - 478807250195.8
putative holliday junction resolvase (modular protein)FMEAI12_4330027Not AvailableNegative4788069 - 478876423339.2
alanyl-trna synthetaseFMEAI12_4330028Not AvailableNegative4788761 - 479140394843.5
conserved exported hypothetical proteinFMEAI12_4330029Not AvailableNegative4791497 - 479184711917.8
conserved hypothetical proteinFMEAI12_4330030Not AvailableNegative4791847 - 479234117060.6

Displaying genes 4541 – 4550 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.