Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional repressor, copy family (fragment)FMEAI12_3890029Not AvailableNegative3897376 - 389787317371.2
amp-dependent synthetase and ligaseFMEAI12_3890030Not AvailableNegative3897914 - 390071899619.1
conserved hypothetical proteinFMEAI12_3890031Not AvailableNegative3901013 - 390155220290.4
conserved hypothetical proteinFMEAI12_3890032Not AvailableNegative3901593 - 39017485524.65
deoxyguanosinetriphosphate triphosphohydrolase-like proteinFMEAI12_3890033Not AvailablePositive3901820 - 390312146558.0
dna primaseFMEAI12_3890034Not AvailablePositive3903622 - 390549668308.2
rna polymerase major sigma-43 factor (sigma-a)FMEAI12_3890035Not AvailablePositive3905537 - 390671544418.4
methyltransferase type 12FMEAI12_3890036Not AvailablePositive3906883 - 390777931904.4
glycosyl transferase group 1FMEAI12_3890037Not AvailableNegative3907798 - 390895841019.2
methyltransferase type 11FMEAI12_3890038Not AvailablePositive3909194 - 390991925893.8

Displaying genes 3681 – 3690 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.