Parafrankia sp. Ea1.12

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Parafrankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusParafrankia
SpeciesParafrankia sp. Ea1.12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. Ea1.12 isolate Framoi1121 genome assembly, contig:

Gene Summary

Adenine Count

1134083 bp

Thymine Count

1138504 bp

Guanine Count

2881489 bp

Cytosine Count

2868343 bp

Genome Length

8022419 bp

Protein-coding Genes

7577 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin reductase domain protein fmn-bindingFMEAI12_1690011Not AvailableNegative174819 - 17553224284.7
conserved membrane hypothetical proteinFMEAI12_1690012Not AvailableNegative175668 - 17629721374.5
peptidase s1 and s6 chymotrypsin/hapFMEAI12_1690013Not AvailableNegative176392 - 17742334666.4
bifunctional beta-d-glucosidase/beta-d-fucosidase (fragment)FMEAI12_1700002Not AvailablePositive177855 - 17864028562.7
hth-type transcriptional regulator celrFMEAI12_1700003Not AvailablePositive178637 - 17967136000.2
atp-dependent dna helicase recqFMEAI12_1700004Not AvailablePositive179808 - 18162566280.4
transcriptional regulator, sarp family (fragment)FMEAI12_1700005Not AvailableNegative181695 - 18244428111.0
integrase catalytic region (fragment)FMEAI12_1710001Not AvailablePositive182610 - 18317021489.0
conserved hypothetical proteinFMEAI12_1710002Not AvailableNegative183258 - 18411230572.6
ycei family protein (fragment)FMEAI12_1710003Not AvailableNegative184288 - 18477917987.9

Displaying genes 171 – 180 of 7631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.