Sediminispirochaeta smaragdinae DSM 11293

SpirillaNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Sediminispirochaeta

Description

Sediminispirochaeta smaragdinae DSM 11293 is a nonsporulating, anaerobic bacterium characterized by its spirilla shape and its role as a chemoorganotroph, utilizing organic compounds as an energy source. This microbe thrives in specialized habitats, which likely reflect its adaptation to specific environmental conditions that may not be conducive to other microbial life forms. The anaerobic nature of S. smaragdinae suggests a metabolic process that is independent of oxygen, potentially involving fermentation or anaerobic respiration to sustain its energy needs. Its spirilla morphology may confer advantages in motility and colonization within its specialized habitat, allowing for effective navigation through complex environments, such as sediment layers or anaerobic niches. The ecological implications of S. smaragdinae's lifestyle highlight the importance of anaerobic microorganisms in biogeochemical cycles, particularly in the decomposition of organic matter, which contributes to nutrient cycling in its environment. This positions S. smaragdinae as a potential player in the maintenance of anaerobic ecosystems, emphasizing the critical roles that such specialized microbes hold in sustaining ecological balance and facilitating energy flow within their habitats.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSediminispirochaeta
SpeciesSediminispirochaeta smaragdinae
StrainDSM 11293

Profile

Physiology
Gram staining propertiesNot Available
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sediminispirochaeta smaragdinae DSM 11293
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Sediminispirochaeta smaragdinae DSM 11293, complete sequence.

Gene Summary

Adenine Count

1191501 bp

Thymine Count

1183646 bp

Guanine Count

1138528 bp

Cytosine Count

1140295 bp

Genome Length

4653970 bp

Protein-coding Genes

4268 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3842 family proteinSPIRS_RS19350Not AvailablePositive4141893 - 414231514221.4
atp-dependent sacrificial sulfur transferase lareSPIRS_RS19355Not AvailablePositive4142543 - 414342432982.6
nickel pincer cofactor biosynthesis protein larcSPIRS_RS19360Not AvailablePositive4143437 - 414467545438.7
nickel pincer cofactor biosynthesis protein larbSPIRS_RS19365Not AvailablePositive4144672 - 414544827248.8
class i sam-dependent methyltransferaseSPIRS_RS19370Not AvailablePositive4145441 - 414629232322.0
abc transporter substrate-binding proteinSPIRS_RS19375Not AvailablePositive4146282 - 414748144973.0
feccd family abc transporter permeaseSPIRS_RS19380Not AvailablePositive4147471 - 414850236989.4
abc transporter atp-binding proteinSPIRS_RS19385Not AvailablePositive4148513 - 414926827500.8
atp-binding proteinSPIRS_RS19390Not AvailablePositive4149374 - 415196298024.8
response regulatorSPIRS_RS19395Not AvailablePositive4151955 - 415307942269.9

Displaying genes 3891 – 3900 of 4359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.