Sediminispirochaeta smaragdinae DSM 11293

SpirillaNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Sediminispirochaeta

Description

Sediminispirochaeta smaragdinae DSM 11293 is a nonsporulating, anaerobic bacterium characterized by its spirilla shape and its role as a chemoorganotroph, utilizing organic compounds as an energy source. This microbe thrives in specialized habitats, which likely reflect its adaptation to specific environmental conditions that may not be conducive to other microbial life forms. The anaerobic nature of S. smaragdinae suggests a metabolic process that is independent of oxygen, potentially involving fermentation or anaerobic respiration to sustain its energy needs. Its spirilla morphology may confer advantages in motility and colonization within its specialized habitat, allowing for effective navigation through complex environments, such as sediment layers or anaerobic niches. The ecological implications of S. smaragdinae's lifestyle highlight the importance of anaerobic microorganisms in biogeochemical cycles, particularly in the decomposition of organic matter, which contributes to nutrient cycling in its environment. This positions S. smaragdinae as a potential player in the maintenance of anaerobic ecosystems, emphasizing the critical roles that such specialized microbes hold in sustaining ecological balance and facilitating energy flow within their habitats.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSediminispirochaeta
SpeciesSediminispirochaeta smaragdinae
StrainDSM 11293

Profile

Physiology
Gram staining propertiesNot Available
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sediminispirochaeta smaragdinae DSM 11293
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Sediminispirochaeta smaragdinae DSM 11293, complete sequence.

Gene Summary

Adenine Count

1191501 bp

Thymine Count

1183646 bp

Guanine Count

1138528 bp

Cytosine Count

1140295 bp

Genome Length

4653970 bp

Protein-coding Genes

4268 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorSPIRS_RS18910Not AvailableNegative4046616 - 404722122340.7
regulatory protein recxSPIRS_RS18915Not AvailableNegative4047286 - 404778918957.0
30s ribosomal protein s9SPIRS_RS18920Not AvailableNegative4047912 - 404830414268.1
50s ribosomal protein l13SPIRS_RS18925Not AvailableNegative4048324 - 404875216176.6
ferredoxinSPIRS_RS22245Not AvailablePositive4048951 - 40491788406.01
hypothetical proteinSPIRS_RS18930Not AvailableNegative4049144 - 404944311103.2
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeSPIRS_RS18935Not AvailableNegative4049430 - 405033533588.6
atp-dependent helicaseSPIRS_RS18940Not AvailableNegative4050325 - 405251181719.7
30s ribosomal protein s12 methylthiotransferase rimoSPIRS_RS18945Not AvailableNegative4052508 - 405383349205.4
helix-turn-helix domain-containing proteinSPIRS_RS18950Not AvailableNegative4053840 - 405495841630.3

Displaying genes 3801 – 3810 of 4359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.