Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Spirochaetaceae
Genus
Sediminispirochaeta
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Spirochaetaceae |
| Genus | Sediminispirochaeta |
| Species | Sediminispirochaeta smaragdinae |
| Strain | DSM 11293 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1191501 bp
Thymine Count
1183646 bp
Guanine Count
1138528 bp
Cytosine Count
1140295 bp
Genome Length
4653970 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SPIRS_RS01550 | Not Available | Positive | 316826 - 318184 | 50595.4 |
| carbohydrate abc transporter permease | SPIRS_RS01555 | Not Available | Positive | 318256 - 319140 | 32637.2 |
| carbohydrate abc transporter permease | SPIRS_RS01560 | Not Available | Positive | 319155 - 319988 | 31065.1 |
| uroporphyrinogen decarboxylase family protein | SPIRS_RS01565 | Not Available | Positive | 320000 - 321142 | 43280.0 |
| is3 family transposase | SPIRS_RS22615 | Not Available | Positive | 321241 - 321423 | 7014.58 |
| deor/glpr family dna-binding transcription regulator | SPIRS_RS01570 | Not Available | Positive | 321466 - 322020 | 20228.5 |
| aspartate--trna ligase | SPIRS_RS01575 | Not Available | Negative | 322127 - 323911 | 66928.2 |
| vancomycin high temperature exclusion protein | SPIRS_RS01580 | Not Available | Positive | 324019 - 324651 | 23931.2 |
| hypothetical protein | SPIRS_RS01585 | Not Available | Negative | 324710 - 325132 | 15241.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | SPIRS_RS01590 | Not Available | Positive | 325215 - 325895 | 24828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
