Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Spirochaetaceae
Genus
Sediminispirochaeta
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Spirochaetaceae |
| Genus | Sediminispirochaeta |
| Species | Sediminispirochaeta smaragdinae |
| Strain | DSM 11293 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1191501 bp
Thymine Count
1183646 bp
Guanine Count
1138528 bp
Cytosine Count
1140295 bp
Genome Length
4653970 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-deoxy-glucuronate isomerase | SPIRS_RS15090 | Not Available | Negative | 3199046 - 3199861 | 31399.1 |
| laci family dna-binding transcriptional regulator | SPIRS_RS15095 | Not Available | Negative | 3199883 - 3200908 | 38385.6 |
| inositol 2-dehydrogenase | SPIRS_RS15100 | Not Available | Negative | 3200909 - 3201922 | 37685.1 |
| transketolase family protein | SPIRS_RS15105 | Not Available | Negative | 3202282 - 3203241 | 34241.4 |
| transketolase | SPIRS_RS15110 | Not Available | Negative | 3203238 - 3204080 | 30954.1 |
| fadr/gntr family transcriptional regulator | SPIRS_RS15115 | Not Available | Positive | 3204182 - 3204952 | 29058.6 |
| tolc family protein | SPIRS_RS15120 | Not Available | Negative | 3205028 - 3206362 | 48830.7 |
| efflux rnd transporter permease subunit | SPIRS_RS15125 | Not Available | Negative | 3206368 - 3209484 | 112113.0 |
| efflux rnd transporter periplasmic adaptor subunit | SPIRS_RS15130 | Not Available | Negative | 3209495 - 3210538 | 38092.9 |
| tetr/acrr family transcriptional regulator | SPIRS_RS15135 | Not Available | Negative | 3210613 - 3211290 | 25485.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
