Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Spirochaetaceae
Genus
Sediminispirochaeta
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Spirochaetaceae |
| Genus | Sediminispirochaeta |
| Species | Sediminispirochaeta smaragdinae |
| Strain | DSM 11293 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1191501 bp
Thymine Count
1183646 bp
Guanine Count
1138528 bp
Cytosine Count
1140295 bp
Genome Length
4653970 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine decarboxylase mfna | SPIRS_RS08695 | Not Available | Negative | 1853454 - 1854632 | 42562.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SPIRS_RS08700 | Not Available | Negative | 1854643 - 1855425 | 27699.2 |
| 4-phosphopantoate--beta-alanine ligase | SPIRS_RS08705 | Not Available | Negative | 1855422 - 1856192 | 27950.9 |
| pantoate kinase | SPIRS_RS08710 | Not Available | Negative | 1856185 - 1857126 | 33203.3 |
| pqq-binding-like beta-propeller repeat protein | SPIRS_RS08715 | Not Available | Positive | 1857203 - 1858930 | 62614.7 |
| p83/100 family protein | SPIRS_RS08720 | Not Available | Positive | 1858963 - 1860573 | 58678.7 |
| parb n-terminal domain-containing protein | SPIRS_RS08725 | Not Available | Negative | 1860596 - 1861036 | 17092.9 |
| penicillin-binding protein 1a | SPIRS_RS08730 | Not Available | Negative | 1861055 - 1863547 | 92810.4 |
| pega domain-containing protein | SPIRS_RS08735 | Not Available | Negative | 1863745 - 1864740 | 36511.4 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | SPIRS_RS08740 | Not Available | Negative | 1864737 - 1865645 | 33341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
