Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Spirochaetaceae
Genus
Sediminispirochaeta
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Spirochaetaceae |
| Genus | Sediminispirochaeta |
| Species | Sediminispirochaeta smaragdinae |
| Strain | DSM 11293 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1191501 bp
Thymine Count
1183646 bp
Guanine Count
1138528 bp
Cytosine Count
1140295 bp
Genome Length
4653970 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SPIRS_RS08445 | Not Available | Positive | 1791893 - 1792942 | 38647.7 |
| dihydrodipicolinate synthase family protein | SPIRS_RS08450 | Not Available | Positive | 1792966 - 1793886 | 33374.2 |
| hydroxyacid dehydrogenase | SPIRS_RS08455 | Not Available | Positive | 1793883 - 1794866 | 35240.3 |
| amidohydrolase family protein | SPIRS_RS08460 | Not Available | Positive | 1794882 - 1796057 | 43157.5 |
| c4-dicarboxylate trap transporter substrate-binding protein | SPIRS_RS08465 | Not Available | Positive | 1796076 - 1797122 | 38333.9 |
| trap transporter small permease | SPIRS_RS08470 | Not Available | Positive | 1797180 - 1797689 | 19116.0 |
| trap transporter large permease | SPIRS_RS08475 | Not Available | Positive | 1797690 - 1798973 | 46397.5 |
| glycosyltransferase family 4 protein | SPIRS_RS08480 | Not Available | Positive | 1799185 - 1801464 | 86082.9 |
| glycoside hydrolase family 130 protein | SPIRS_RS08485 | Not Available | Positive | 1801471 - 1802922 | 55389.4 |
| glycosyltransferase family 4 protein | SPIRS_RS08490 | Not Available | Positive | 1802926 - 1803939 | 38319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
