Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Spirochaetaceae
Genus
Sediminispirochaeta
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Spirochaetaceae |
| Genus | Sediminispirochaeta |
| Species | Sediminispirochaeta smaragdinae |
| Strain | DSM 11293 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1191501 bp
Thymine Count
1183646 bp
Guanine Count
1138528 bp
Cytosine Count
1140295 bp
Genome Length
4653970 bp
Protein-coding Genes
4268 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent transporter | SPIRS_RS05375 | Not Available | Positive | 1117622 - 1119118 | 54559.6 |
| mets family nss transporter small subunit | SPIRS_RS22345 | Not Available | Positive | 1119128 - 1119229 | 3551.65 |
| helix-turn-helix transcriptional regulator | SPIRS_RS05380 | Not Available | Positive | 1119415 - 1120425 | 38297.9 |
| crispr-associated helicase/endonuclease cas3 | SPIRS_RS05385 | Not Available | Positive | 1120569 - 1122794 | 83504.3 |
| type i-c crispr-associated protein cas5c | SPIRS_RS05390 | Not Available | Positive | 1122804 - 1123466 | 25279.4 |
| type i-c crispr-associated protein cas8c/csd1 | SPIRS_RS05395 | Not Available | Positive | 1123463 - 1125235 | 67118.9 |
| type i-c crispr-associated protein cas7/csd2 | SPIRS_RS05400 | Not Available | Positive | 1125235 - 1126101 | 32618.0 |
| crispr-associated protein cas4 | SPIRS_RS05405 | Not Available | Positive | 1126143 - 1126787 | 25149.9 |
| type i-c crispr-associated endonuclease cas1c | SPIRS_RS05410 | Not Available | Positive | 1126787 - 1127812 | 39309.6 |
| crispr-associated endonuclease cas2 | SPIRS_RS05415 | Not Available | Positive | 1127824 - 1128117 | 11418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
