Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase type ii | SAMN04488505_11714 | Not Available | Positive | 8304048 - 8305160 | 41422.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_11715 | Not Available | Positive | 8305233 - 8306093 | 32835.6 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488505_11716 | Not Available | Positive | 8306148 - 8306693 | 20596.4 |
| cell division protein ftsz | SAMN04488505_11717 | Not Available | Negative | 8306806 - 8308542 | 62486.2 |
| cell division protein ftsa | SAMN04488505_11718 | Not Available | Negative | 8308661 - 8310076 | 51620.8 |
| cell division protein ftsq | SAMN04488505_11719 | Not Available | Negative | 8310073 - 8311152 | 39618.6 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04488505_11720 | Not Available | Negative | 8311240 - 8312610 | 50945.6 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04488505_11721 | Not Available | Negative | 8312637 - 8313728 | 39345.3 |
| cell division protein ftsw | SAMN04488505_11722 | Not Available | Negative | 8313860 - 8315065 | 44454.6 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04488505_11723 | Not Available | Negative | 8315159 - 8316550 | 51366.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
