Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04488505_101507 | Not Available | Positive | 654310 - 655629 | 49815.4 |
| carboxypepd_reg-like domain-containing protein | SAMN04488505_101508 | Not Available | Negative | 655782 - 656552 | 29693.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488505_101509 | Not Available | Positive | 656907 - 657350 | 16618.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_101510 | Not Available | Positive | 657505 - 660999 | 127143.0 |
| starch-binding associating with outer membrane | SAMN04488505_101511 | Not Available | Positive | 661018 - 662481 | 53973.9 |
| protein of unknown function | SAMN04488505_101512 | Not Available | Positive | 662604 - 663338 | 28766.7 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_101513 | Not Available | Negative | 663472 - 665856 | 89407.3 |
| arac-type dna-binding protein | SAMN04488505_101514 | Not Available | Positive | 666073 - 666483 | 15555.7 |
| ycxb-like protein | SAMN04488505_101515 | Not Available | Negative | 666476 - 666955 | 18713.9 |
| hypothetical protein | SAMN04488505_101516 | Not Available | Negative | 666990 - 667577 | 22305.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
