Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04488505_108142 | Not Available | Negative | 6451604 - 6452668 | 39844.6 |
| outer membrane protein tolc | SAMN04488505_108143 | Not Available | Negative | 6452674 - 6454008 | 50732.5 |
| transcriptional regulator, arac family | SAMN04488505_108144 | Not Available | Positive | 6454141 - 6454926 | 30455.1 |
| hypothetical protein | SAMN04488505_108145 | Not Available | Negative | 6454936 - 6455310 | 13614.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_108146 | Not Available | Positive | 6455442 - 6456083 | 24767.0 |
| tannase and feruloyl esterase | SAMN04488505_108147 | Not Available | Positive | 6456134 - 6457798 | 60479.0 |
| two component regulator propeller | SAMN04488505_108148 | Not Available | Positive | 6457881 - 6461957 | 153451.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108149 | Not Available | Positive | 6462147 - 6465332 | 116364.0 |
| starch-binding associating with outer membrane | SAMN04488505_108150 | Not Available | Positive | 6465349 - 6467187 | 68253.4 |
| alginate lyase | SAMN04488505_108151 | Not Available | Positive | 6467217 - 6470636 | 126691.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
