Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108132 | Not Available | Positive | 6434286 - 6437414 | 115100.0 |
| starch-binding associating with outer membrane | SAMN04488505_108133 | Not Available | Positive | 6437428 - 6439194 | 64487.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108134 | Not Available | Positive | 6439230 - 6442370 | 115314.0 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN04488505_108135 | Not Available | Positive | 6442381 - 6443520 | 42380.7 |
| protein of unknown function | SAMN04488505_108136 | Not Available | Positive | 6443511 - 6444689 | 43730.1 |
| alpha-1,2-mannosidase, putative | SAMN04488505_108137 | Not Available | Positive | 6444700 - 6446973 | 85231.9 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488505_108138 | Not Available | Positive | 6447106 - 6448317 | 43968.8 |
| transcriptional regulator, laci family | SAMN04488505_108139 | Not Available | Positive | 6448345 - 6449367 | 38077.5 |
| hypothetical protein | SAMN04488505_108140 | Not Available | Negative | 6449434 - 6449931 | 18888.8 |
| hypothetical protein | SAMN04488505_108141 | Not Available | Negative | 6450022 - 6451611 | 60796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
