Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN04488505_108122 | Not Available | Positive | 6420361 - 6420702 | 12443.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_108123 | Not Available | Positive | 6420747 - 6421988 | 47145.3 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN04488505_108124 | Not Available | Positive | 6422417 - 6423259 | 31821.2 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488505_108125 | Not Available | Negative | 6423395 - 6425974 | 95075.7 |
| alpha-1,2-mannosidase, putative | SAMN04488505_108126 | Not Available | Positive | 6426312 - 6428612 | 85417.9 |
| lysophospholipase l1 | SAMN04488505_108127 | Not Available | Positive | 6428653 - 6430014 | 51501.2 |
| s-formylglutathione hydrolase frmb | SAMN04488505_108128 | Not Available | Positive | 6430023 - 6430847 | 31137.2 |
| starch-binding associating with outer membrane | SAMN04488505_108129 | Not Available | Positive | 6430981 - 6432759 | 64661.0 |
| lipocalin-like domain | SAMN04488505_108130 | Not Available | Positive | 6432777 - 6433202 | 15745.9 |
| protein of unknown function | SAMN04488505_108131 | Not Available | Positive | 6433229 - 6434245 | 36611.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
