Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_108112 | Not Available | Positive | 6408444 - 6408749 | 11072.0 |
| hypothetical protein | SAMN04488505_108113 | Not Available | Positive | 6408965 - 6411220 | 77521.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_108114 | Not Available | Positive | 6411223 - 6412950 | 62331.6 |
| arac-type dna-binding protein | SAMN04488505_108115 | Not Available | Positive | 6413032 - 6413955 | 34605.5 |
| hypothetical protein | SAMN04488505_108116 | Not Available | Negative | 6414036 - 6414326 | 11297.4 |
| hypothetical protein | SAMN04488505_108117 | Not Available | Positive | 6414346 - 6416823 | 94554.2 |
| transglutaminase-like superfamily protein | SAMN04488505_108118 | Not Available | Negative | 6416854 - 6418014 | 44333.4 |
| protein of unknown function | SAMN04488505_108119 | Not Available | Negative | 6418075 - 6418266 | 7286.62 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_108120 | Not Available | Negative | 6418368 - 6419363 | 34711.2 |
| snoal-like domain-containing protein | SAMN04488505_108121 | Not Available | Positive | 6419909 - 6420265 | 13398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
