Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase | SAMN04488505_108102 | Not Available | Positive | 6388043 - 6390025 | 72622.1 |
| beta-xylosidase | SAMN04488505_108103 | Not Available | Positive | 6390068 - 6391633 | 57571.6 |
| sialate o-acetylesterase | SAMN04488505_108104 | Not Available | Positive | 6391690 - 6393612 | 71644.9 |
| signal transduction histidine kinase | SAMN04488505_108105 | Not Available | Positive | 6393867 - 6397910 | 153751.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108106 | Not Available | Positive | 6398082 - 6401156 | 111639.0 |
| starch-binding associating with outer membrane | SAMN04488505_108107 | Not Available | Positive | 6401175 - 6402839 | 61684.5 |
| o-glycosyl hydrolase | SAMN04488505_108108 | Not Available | Positive | 6402889 - 6404436 | 56544.4 |
| beta-galactosidase | SAMN04488505_108109 | Not Available | Positive | 6404452 - 6406281 | 69048.0 |
| hydrophobic w protein | SAMN04488505_108110 | Not Available | Positive | 6406588 - 6407511 | 34033.0 |
| hypothetical protein | SAMN04488505_108111 | Not Available | Positive | 6407994 - 6408428 | 16452.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
