Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline iminopeptidase | SAMN04488505_10882 | Not Available | Positive | 6364396 - 6365442 | 39089.9 |
| n-acetyltransferase, gnat superfamily (includes histone acetyltransferase hpa2) | SAMN04488505_10883 | Not Available | Negative | 6365568 - 6366035 | 17472.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10884 | Not Available | Positive | 6366210 - 6366755 | 21665.1 |
| fecr family protein | SAMN04488505_10885 | Not Available | Positive | 6366883 - 6367914 | 38204.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10886 | Not Available | Positive | 6367950 - 6371504 | 131941.0 |
| susd family protein | SAMN04488505_10887 | Not Available | Positive | 6371736 - 6373094 | 50884.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488505_10888 | Not Available | Positive | 6373131 - 6375113 | 74673.9 |
| hypothetical protein | SAMN04488505_10889 | Not Available | Positive | 6375110 - 6376183 | 39339.1 |
| response regulator receiver domain-containing protein | SAMN04488505_10890 | Not Available | Positive | 6376230 - 6376775 | 20679.3 |
| response regulator receiver domain-containing protein | SAMN04488505_10891 | Not Available | Positive | 6376857 - 6377261 | 15219.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
