Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10872 | Not Available | Positive | 6343348 - 6346980 | 134452.0 |
| rhs repeat-associated core domain-containing protein | SAMN04488505_10873 | Not Available | Positive | 6346982 - 6352816 | 215293.0 |
| hypothetical protein | SAMN04488505_10874 | Not Available | Negative | 6353054 - 6354073 | 37336.7 |
| transcriptional regulator, tetr family | SAMN04488505_10875 | Not Available | Positive | 6354282 - 6354878 | 23057.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488505_10876 | Not Available | Positive | 6354896 - 6356047 | 41815.1 |
| acetyl esterase/lipase | SAMN04488505_10877 | Not Available | Negative | 6356053 - 6356868 | 30691.3 |
| hypothetical protein | SAMN04488505_10878 | Not Available | Positive | 6357035 - 6357877 | 31767.1 |
| hypothetical protein | SAMN04488505_10879 | Not Available | Positive | 6358051 - 6360372 | 86932.5 |
| hypothetical protein | SAMN04488505_10880 | Not Available | Positive | 6360372 - 6362807 | 89172.3 |
| peroxiredoxin | SAMN04488505_10881 | Not Available | Positive | 6363523 - 6364113 | 21995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
