Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump subunit acrb | SAMN04488505_10862 | Not Available | Positive | 6326424 - 6329684 | 118217.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_10863 | Not Available | Positive | 6329689 - 6330975 | 46554.4 |
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN04488505_10864 | Not Available | Positive | 6331473 - 6334688 | 120634.0 |
| hypothetical protein | SAMN04488505_10865 | Not Available | Negative | 6334798 - 6335289 | 17283.8 |
| amidase | SAMN04488505_10866 | Not Available | Positive | 6335444 - 6337033 | 56389.7 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488505_10867 | Not Available | Negative | 6337094 - 6338239 | 42415.7 |
| hypothetical protein | SAMN04488505_10868 | Not Available | Positive | 6338392 - 6339081 | 25279.8 |
| hypothetical protein | SAMN04488505_10869 | Not Available | Positive | 6339092 - 6340834 | 65853.8 |
| hypothetical protein | SAMN04488505_10870 | Not Available | Positive | 6341460 - 6341639 | 6647.16 |
| 2,4-dienoyl-coa reductase | SAMN04488505_10871 | Not Available | Positive | 6341803 - 6342876 | 38635.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
