Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10852 | Not Available | Negative | 6315716 - 6316090 | 13267.0 |
| transcriptional regulator, luxr family | SAMN04488505_10853 | Not Available | Positive | 6316196 - 6316669 | 17988.6 |
| protein of unknown function | SAMN04488505_10854 | Not Available | Positive | 6316799 - 6317338 | 20213.2 |
| putative efflux protein, mate family | SAMN04488505_10855 | Not Available | Negative | 6317499 - 6318923 | 51266.8 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN04488505_10856 | Not Available | Negative | 6319327 - 6319902 | 20844.0 |
| alpha-galactosidase | SAMN04488505_10857 | Not Available | Positive | 6320055 - 6322505 | 87406.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_10858 | Not Available | Positive | 6322765 - 6323448 | 25680.9 |
| signal transduction histidine kinase | SAMN04488505_10859 | Not Available | Positive | 6323461 - 6324774 | 49880.1 |
| hypothetical protein | SAMN04488505_10860 | Not Available | Positive | 6324806 - 6324988 | 7034.55 |
| outer membrane protein tolc | SAMN04488505_10861 | Not Available | Positive | 6324981 - 6326375 | 51392.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
