Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10842 | Not Available | Negative | 6308267 - 6308866 | 22818.7 |
| protein of unknown function | SAMN04488505_10843 | Not Available | Positive | 6308979 - 6309635 | 25013.6 |
| putative transcriptional regulator | SAMN04488505_10844 | Not Available | Positive | 6309635 - 6309844 | 7599.55 |
| hypothetical protein | SAMN04488505_10845 | Not Available | Negative | 6309865 - 6310338 | 17572.1 |
| two component transcriptional regulator, lyttr family | SAMN04488505_10846 | Not Available | Negative | 6310369 - 6311085 | 27812.8 |
| histidine kinase | SAMN04488505_10847 | Not Available | Negative | 6311082 - 6312101 | 39078.9 |
| hypothetical protein | SAMN04488505_10848 | Not Available | Positive | 6312288 - 6313091 | 30155.1 |
| hypothetical protein | SAMN04488505_10849 | Not Available | Positive | 6313116 - 6313847 | 27426.2 |
| hypothetical protein | SAMN04488505_10850 | Not Available | Positive | 6314006 - 6314614 | 21646.4 |
| type 1 glutamine amidotransferase (gatase1) | SAMN04488505_10851 | Not Available | Negative | 6314675 - 6315592 | 34757.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
